Resource

Id ATAC-seq/ENCSR000RBTcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR000RBT [biosample_summary="Homo sapiens HG03571"]
Description
Labels
  • accession: ENCSR000RBT
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0010889/
  • biosample_summary: Homo sapiens HG03571
  • date_created: 2020-11-24T22:02:43.383446+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR000RBT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR000RBT float

ATAC-seq_ENCSR000RBT
ATAC-seq ENCSR000RBT [biosample_summary="Homo sapiens HG03571"]
 HISTOGRAM FOR ATAC-seq_ENCSR000RBT [1.5, 37.9]
n
45,944,753
mean
6.61
sd
3.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 459447531.43% 87467
chr1 4235978 1.70% 7944
chr2 3955867 1.63% 7786
chr3 3230691 1.63% 6372
chr4 2584530 1.36% 5147
chr5 2777553 1.53% 5462
chr6 3093844 1.81% 5953
chr7 2562647 1.61% 4925
chr8 2225695 1.53% 4361
chr9 1847067 1.33% 3521
chr10 2230816 1.67% 4295
chr11 2178651 1.61% 4138
chr12 2297209 1.72% 4343
chr13 1255492 1.10% 2450
chr14 1414318 1.32% 2591
chr15 1348174 1.32% 2502
chr16 1344989 1.49% 2379
chr17 1597656 1.92% 2807
chr18 1007585 1.25% 1996
chr19 1307416 2.23% 2084
chr20 970353 1.51% 1853
chr21 442567 0.95% 805
chr22 610732 1.20% 1057
chrX 1343665 0.86% 2541
chrY 81258 0.14% 155
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 87467 150 2754 525.28 433
global segment-length histogram

Files

Filename Size md5
ENCFF430IAA.bed.gz 3.3 MB fe417e60cf044f1499c6eae2feab3198
ENCFF430IAA.tabix.bed.gz 978.18 KB 5bae33d0e3c542591f97f2e45d4947f0
ENCFF430IAA.tabix.bed.gz.tbi 410.53 KB c35162b752c35bfcaa3431f7c1558357
genomic_resource.yaml 1.28 KB ad6d8806ba494307654ec24f86b161a6
statistics/